BIO515 Bio-Imaging Systems

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Course Code Course Title Weekly Hours* ECTS Weekly Class Schedule
T P
BIO515 Bio-Imaging Systems 3 0 6 We 17:00-20:00
Prerequisite It is a prerequisite to
Lecturer Mohamed Ragab Office Hours Schedule Mon 15:00-16:00 , Tues 11:00-13:00 Wed 10:00-13:00
E-mail mragab@ius.edu.ba
Phone +387957203 Office / Room No A F1.5
Assistant
E-mail mragab@ius.edu.ba
Course Objectives 1- Recognize Bio-Imaging systems used in Biological research. 2- Explain bioimaging techniques in many types of biological and biomedical research. 3- Use images softwares linked to microscopy. 4- Perform improvements on digital images scientifically. 5- Discuss and understand of microscopy theory and to be proficient with modern microscopy techniques.
Textbook Fundamentals of light microscopy and electronic imaging, Douglas B. Murphy - Wiley. 10 9 8 7 6 5 4 3 2 1
Learning Outcomes After successful  completion of the course, the student will be able to:
  1. Recognize Bio-Imaging systems used in Biological research.
  2. Explain bioimaging techniques in many types of biological and biomedical research.
  3. Use images softwares linked to microscopy.
  4. Perform improvements on digital images scientifically.
  5. Discuss and understand of microscopy theory and to be proficient with modern microscopy techniques.
Teaching Methods Class discussions with examples. Active tutorial sessions for engaged learning and continuous feedback on progress. Team assigments. Team projects that involve real data, computer analysis, summary, interpretation and reporting.
WEEK TOPIC REFERENCE
Week 1 FUNDAMENTALS OF LIGHT MICROSCOPY Book Chapter
Week 2 FUNDAMENTALS OF LIGHT MICROSCOPY Book Chapter
Week 3 ILLUMINATORS, FILTERS, AND THE ISOLATION OFSPECIFIC WAVELENGTHS Book Chapter
Week 4 PROPERTIES OF POLARIZED LIGHT Book Chapter
Week 5 POLARIZATION MICROSCOPY Book Chapter
Week 6 FLUORESCENCE MICROSCOPY Book Chapter
Week 7 FLUORESCENCE MICROSCOPY Book Chapter
Week 8 CONFOCAL LASER SCANNING MICROSCOPY Book Chapter
Week 9 CONFOCAL LASER SCANNING MICROSCOPY Book Chapter
Week 10 TWO-PHOTON EXCITATION FLUORESCENCEMICROSCOPY Book Chapter
Week 11 SUPERRESOLUTION IMAGING Book Chapter
Week 12 IMAGING LIVING CELLS WITH THE MICROSCOPE Book Chapter
Week 13 FUNDAMENTALS OF DIGITAL IMAGING Book Chapter
Week 14 DIGITAL IMAGE PROCESSING Book Chapter
Week 15 Revision
Assessment Methods and Criteria Evaluation Tool Quantity Weight Alignment with LOs
Final Exam 1 40 1,2,3,4,5
Semester Evaluation Compenents
Term project and presentation 2 30 1,2,3,4,5
Assignments 2 30 1,2,4,5
***     ECTS Credit Calculation     ***
 Activity Hours Weeks Student Workload Hours Activity Hours Weeks Student Workload Hours
Lectures 3 15 45 Term Project/presentation 7 2 14
Assignments 7 2 14 Home study 4 15 60
Final Exam study 17 1 17 0
        Total Workload Hours = 150
*T= Teaching, P= Practice ECTS Credit = 6
Course Academic Quality Assurance: Semester Student Survey Last Update Date: 07/10/2019
QR Code for https://ecampus.ius.edu.ba/syllabus/bio515-bio-imaging-systems

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